Database: A.hypogaea-Shitouqi
The .best format files, filtered out from TRF (v4.09) results (Percent Matches ≥ 80).
The core flow is shown in flow-to-get-NR-TR-arrays.pdf.
In the files:
1. one: only one record (RC) exists in a range, no overlap.
2. same-range: multiple RCs found in a range, but each has the same indices as the indices of the range.
3. almost-same-range-to-total: At least one RC covers 80% or more of the range and has the max copy number (among all the records of the range).
4. complicated: others.
- Chr01.best.gz 951K 2020-01-05 12:17:45
- Chr02.best.gz 899K 2020-01-05 12:17:47
- Chr03.best.gz 1.2M 2020-01-05 12:17:52
- Chr04.best.gz 1.1M 2020-01-05 12:17:53
- Chr05.best.gz 1022K 2020-01-05 12:17:59
- Chr06.best.gz 954K 2020-01-05 12:17:58
- Chr07.best.gz 769K 2020-01-05 12:17:59
- Chr08.best.gz 544K 2020-01-05 12:17:54
- Chr09.best.gz 1017K 2020-01-05 12:17:59
- Chr10.best.gz 1001K 2020-01-05 12:17:57
- Chr11.best.gz 1.4M 2020-01-05 12:17:47
- Chr12.best.gz 1.1M 2020-01-05 12:17:44
- Chr13.best.gz 1.4M 2020-01-05 12:17:44
- Chr14.best.gz 1.3M 2020-01-05 12:17:59
- Chr15.best.gz 1.4M 2020-01-05 12:17:46
- Chr16.best.gz 1.4M 2020-01-05 12:17:54
- Chr17.best.gz 1.2M 2020-01-05 12:17:51
- Chr18.best.gz 1.3M 2020-01-05 12:17:56
- Chr19.best.gz 1.5M 2020-01-05 12:17:59
- Chr20.best.gz 1.3M 2020-01-05 12:17:55