Database: IWGSC-v1.0
The .best format files, filtered out from TRF (v4.09) results (Percent Matches ≥ 80).
The core flow is shown in flow-to-get-NR-TR-arrays.pdf.
In the files:
1. one: only one record (RC) exists in a range, no overlap.
2. same-range: multiple RCs found in a range, but each has the same indices as the indices of the range.
3. almost-same-range-to-total: At least one RC covers 80% or more of the range and has the max copy number (among all the records of the range).
4. complicated: others.
- chr1A.best.gz 3.2M 2018-11-09 23:19:47
- chr1B.best.gz 4.1M 2018-11-09 23:20:03
- chr1D.best.gz 3.3M 2018-11-09 23:20:16
- chr2A.best.gz 4.2M 2018-11-09 23:20:32
- chr2B.best.gz 4.8M 2018-11-09 23:20:50
- chr2D.best.gz 4.3M 2018-11-09 23:21:06
- chr3A.best.gz 4.1M 2018-11-09 23:21:22
- chr3B.best.gz 5.0M 2018-11-09 23:21:41
- chr3D.best.gz 4.0M 2018-11-09 23:21:57
- chr4A.best.gz 4.1M 2018-11-09 23:22:13
- chr4B.best.gz 3.9M 2018-11-09 23:22:28
- chr4D.best.gz 3.2M 2018-11-09 23:22:40
- chr5A.best.gz 3.9M 2018-11-09 23:22:56
- chr5B.best.gz 4.3M 2018-11-09 23:23:13
- chr5D.best.gz 3.7M 2018-11-09 23:23:27
- chr6A.best.gz 3.3M 2018-11-09 23:23:40
- chr6B.best.gz 4.3M 2018-11-09 23:23:57
- chr6D.best.gz 3.1M 2018-11-09 23:24:09
- chr7A.best.gz 4.2M 2018-11-09 23:24:26
- chr7B.best.gz 4.6M 2018-11-09 23:24:44
- chr7D.best.gz 4.4M 2018-11-09 23:25:02